Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTTIFPKEQNVTPLFEQILANPTACRRFKDVFLDNLESYQETRGFEKDDTLFAKIILSAYRQSDVSALLLGVC------GRTLFELLRQAFLIPKKLTVDNPFFLTDKEGNFIAKKDDISNREQEKFQEIYQSDLHHSETTIFLVDDDDIVHSYEPDFSISTKRINKKRGILVLYSLPDTLKSGMTESEVYAFIWKTFLHIQEIIPSSRIFYGQETSENADELGVFLPIHHFEKKMLQNIEQVNELVDALREQMVNK |
1GPM Chain:A ((208-404)) | ----WTPAKIIDDAVARIREQVGD----DKVILG-------LSG-GVDSSVTAMLLHRAIGKN-LTCVFVDNGLLRLNEAEQVLDMFGDHFGLNIVHVPAEDRFLSALAG--ENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGTI---------------------------YPDVIESAAK---------------MGLVEPLKELFKDEVRKIGLELG--LPYDMLYRHPFP------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GPM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14318 for 1212 contacts (-11.8/contact) +
2D Compatibility (PS) -17394 + (NN) -10 + (LL) 7360
1D Compatibility (HY) -8400 + (ID) 1200
Total energy: -33962.0 ( -28.02 by residue)
QMean score : 0.330
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