Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKKRLLLASRWIIMLIIYAGLWTYTLFQGDTASWFLTYFFSFILLLLFLSSIYPLKAWKVNRSFVKNTYHDGDLIDMQVSFTRKSRYPVGYLLFQQKIPATFGKVRARQQVVYPLFKKQFTVTLAGFVGVRGIHSFPPVDVETSDAFGLLERSRQLSSEKSLTIYPTYFPNVLEKISEASPENERNAAYWTLKKNSNLHSLREFSSGDRISLIDWKSSAKSDQLMTREFENSATSRLSVIFYGASHP-NFELSLRAAYSFIRKIS--EENGEIRVTLLGDQTSKFAPAKGTSRLQDISTAFAEIAPVDS--L---T-L---QESL-----DSNLHSGEKILLFTPCMDTM---LMQKVTRLTDNKQLQIIT-FQSEHSKAMDAPAIFLEQASLLSRWERETK |
| 1PT6 Chain:A ((7-149)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QLDIVIVLDGSNSIYPWDSVTAFLNDLLKRMDIGPKQTQVGIVQYGENVTHEFNLNKYSSTEEVLVAAKKIVQRGGRQTMTALGTDTARKEAFTEARGARRGVKKVMVIVTDGESHDNHRLKKVIQDCEDENIQRFSIAILGS-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PT6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -62025 for 860 contacts (-72.1/contact) +
2D Compatibility (PS) -13292 + (NN) -7186 + (LL) 20040
1D Compatibility (HY) -1200 + (ID) 400
Total energy: -64063.0 ( -74.49 by residue)
QMean score : 0.485
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