Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIEKTIMERRSIKKAND--EPISRETVNTILEQAAYAPFHSKVEPWNVYVLHTLAEKERYIEKIIEFNEREQGVSFSEAEIADLKAGYAKKIITPPYLLIVTTNIIGHG-KKDFESIGATSAFIQNIQLLGWEAGIGMIWRSNRFIFDAKFADDLGIPAEQKIVGTLHLTSLAEVPEAKPRRPLNEWVKNLADL
3K6H Chain:A ((10-196))
KLLDYLRVRRSTPALQLSEPGPSKGEIEEILRLAVRVPDHGKLAPWRFVVYRGEER-VRLSEAALRIALEKNPD----LDLQQQEAER-TRFTRAPVVIAVISTAKPHFKIPEWEQVMSAGAVCLNVIFAANASGFAANWLTEWLAFDPAFLAEIGVSAEEKVAGYIHIGSTTFPPVERPRPELADVVTWVGD-
General information:
TITO was launched using:
RESULT:
Template:
3K6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -68840 for 1314 contacts (-52.4/contact) +
2D Compatibility (PS) -19666 + (NN) -5661 + (LL) 564
1D Compatibility (HY) -6400 + (ID) 2000
Total energy: -102003.0 ( -77.63 by residue)
QMean score : 0.536
(partial model without unconserved sides chains):
PDB file :
Tito_3K6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3K6H-query.scw
PDB file :
Tito_Scwrl_3K6H.pdb
: