Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATQKNLVDLATKAYIYGFPFIFNTQQIERYVTVGIGGTKQVPFNNFTHASRLAEPSDKFVSVNNDTIYSNAPIDVSAGPVVLSVPDTSGRYYVLQFVDAWSNNFAYVGKRATGTSAGKFLLTPPNWNGDVPADMIEIKFPTNIGIIIGRLACDGEADLPTVRELQEQLKITPLNEGKEVDGFPEYDRSLGKELAFFEQLRVYMAQFPPAERDLVKQESFAPIGLMEKGVSPYSNPSEELKNALIEGAKAGLANIKKATTNFKSENGWG-LTQHLFDYNADFFEIGTKK--SLDWVIEDREEAYIIRAVSAITALWGNHGYEAV-YLMTWTDTDGNALNGKNKYTLELNPIPPV-----DSF-WSITMYDLPE-----YFLCENPINRYSIGDRTPGIQYNDDGGITIVVSKDEPTDPKERANWLPAPDAEFRPMFRLYNPQQPLVDGSYHFPGFEKK |
| 1XIP Chain:A ((1-381)) | ASSLKDEVP-TETSEDFGFKFL---------------GQKQILPSFNEKLP--------FASLQNLDISNSKSLFVAAS----------GSKAVVGELQLLRDHITSDSTPLT-----------FKWEKEIP-DVIFVCFH-------------GDQVLVSTRNALYSLDLEELSEFRTVTSFEKP-----------------VFQLKNVNNTLVILNSVNDLSALDLRTKSTKQLAQNVTSFDVTNSQLAVLLKDRSFQSFAWRNG-EMEKQFEFSLPSELEELPVEEYSPLSVTILSPQ-DFLAVFGNVISETDDEVSYDQKMYIIKHID-------GSASFQETFDITPPFGQIVRFPYMYKVTLSGLIEPDANVNVLASSCSSEVSIWDSKQVIEPSQDSERAVLPISEETDKDTNPIGVAVDVVTSGLPLVYILNNE-----GSLQIVGLFH- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XIP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 27391 for 2753 contacts (9.9/contact) +
2D Compatibility (PS) -35488 + (NN) 3627 + (LL) 5488
1D Compatibility (HY) -2000 + (ID) 2300
Total energy: -3282.0 ( -1.19 by residue)
QMean score : 0.007
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