Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MKKITNNLFADIGFLFFILLCFITIGFMINTPDEYLRNIILLNITFLLVIITYFTNLTLGLILNVLYIFIYATYIIYEIVANQIAYGFGSYF--WLIITPLFT----VASAMFTRNTSRLQEENTKIKQQNLYLGTIDQETLLKNIVSFQNDERIFSSISRRYDLPLSLMVIKVRHWRELKRFQSEDEMRLALQDISAILETCIRTSDVLYLLDKDDATWGLLLL---TDEPGGKLVADRIKSRIAEANTEEFAAKYRVKLELRIGTSQFDSEKVKTPLDFIDLATKELEYDV----- |
| 4DMZ Chain:A ((22-321)) | NDQSLRSSLLGLRQLLRELPG------DEAPLDALAETVLALLAQYGSLRIAGLYRVRHDRTPEPQPLATLGEMPVLDADDLLVRTCLERGELVSVRALQVCVPLVDTDGRILALLAVEQMPFFVFNERTFSLLAILAGHIADLLQDIDAQRFSQYLKRSLLDARDHGLPACLYAFELTD-------------ARYGEEVQRLLEGSQRGLDVQLRLRNDEGRRVLLVLLPLTSAEGSQGYLQRLRILFAERFGQA-----RELESLGVRIRQYELDAGNDRQALGHFLFNECGLNDQQVAV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DMZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -155732 for 1958 contacts (-79.5/contact) +
2D Compatibility (PS) -26783 + (NN) 5090 + (LL) 2788
1D Compatibility (HY) 800 + (ID) 1700
Total energy: -175537.0 ( -89.65 by residue)
QMean score : 0.327
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