Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPKSEIRKLLQEIKKQVDNPGNSSTTEIKKMASEAGIDEQTAEEIYHLLTEFYQAVEEHGGIEKYMHSNISWLKIELELLSACYQIAILEDMKVLDISEMLSLNDLRIFPKTPSQLQNTYYKLKKELIQVEDIPKNKPGRKRKTQKNTKKEKTNIFGKVVPAEFKAPASIKEQISYDKSREKNLVDLLSGVKSNVQLLSENQGEENNVYDLLKSIYSLSSLAVQKEELDKKYQDLQTKCQELEQENSYLKQQNETMTDSFHTLVLQVADFAYASDLDQIQALPLFSQQLVVTLNQLGVFKENYKQM |
1T2K Chain:D ((358-394)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WVQSLEKKAEDLSSLNGQLQSEVTLLRNEVAQLKQLL--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1T2K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2546 for 146 contacts (17.4/contact) +
2D Compatibility (PS) -3875 + (NN) -101 + (LL) 20284
1D Compatibility (HY) -1600 + (ID) 350
Total energy: 16904.0 ( 115.78 by residue)
QMean score : 0.507
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