Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNINMKVARVEKDISQEELAKLIHVSRQTISSVEAGNYNPTLNLCIAICKALGKTLDDLF-WEEDDNV
2XIU Chain:B ((5-65))
----NLKLIREKKKISQSELAALLEVSRQTINGIEKNKYNPSLQLALKIAYYLNCPLEDIFQWQP----
General information:
TITO was launched using:
RESULT:
Template:
2XIU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27476 for 374 contacts (-73.5/contact) +
2D Compatibility (PS) -6631 + (NN) -4036 + (LL) 356
1D Compatibility (HY) -6400 + (ID) 1450
Total energy: -45637.0 ( -122.02 by residue)
QMean score : 0.651
(partial model without unconserved sides chains):
PDB file :
Tito_2XIU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XIU-query.scw
PDB file :
Tito_Scwrl_2XIU.pdb
: