Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTERALQVTNLHKKIRKREIIKGISFEVMPGEVFGFLGPNGAGKTTTIRMIVGLIKPTSGT--ILIGGKDIRKNFTEAMRGLGSIVENPEFYTFLTGQENLAYFARMDSSI----KKERIQEVTELVGLEKRINDRVSTYSLGMRQRLGIAQALLSNPKLLILDEPTNGLDPSGIHEMRDFIRALARNEGISVLVSSHLLSEIELLCDRVAIMTDGTIIKTDQVAHLLSSRAQLRWRVTPIEQAKAFLESVTEVEVDGEYLVTAMNEESAEWNEQLVAKGIKVHEIDKRKPSLEDLFLELTGGQSID |
4P32 Chain:B ((3-215)) | -----LTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHL-RDSGLGVLITDHNVRETLAVCERAYIVSQGHLI---------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4P32.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111416 for 1664 contacts (-67.0/contact) +
2D Compatibility (PS) -22496 + (NN) -5265 + (LL) 8052
1D Compatibility (HY) -14800 + (ID) 3400
Total energy: -149325.0 ( -89.74 by residue)
QMean score : 0.558
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