Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEEELEVIHKGLANAKNGF---KAVPGKLYLTATYIVHKPNDY-----FDEEINIPLNRVAKIRGVRTKILGKELLSNILEIDMISGVKYQFVV---NKQKKWLEAVSEVLESRGESEKLG
1ZC3 Chain:B ((5-110))
---GQYLVYNGDLVEYEADHMAQLQRVHGFLMNDCLLVATWLPQRRGMYRYNALYPLDRLAVVNVKDN-----PPMKDMFKLLMFP-ESRIFQAENAKIKREWLEVLEETKRALS------
General information:
TITO was launched using:
RESULT:
Template:
1ZC3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35833 for 613 contacts (-58.5/contact) +
2D Compatibility (PS) -10030 + (NN) 3502 + (LL) 828
1D Compatibility (HY) -2800 + (ID) 600
Total energy: -44933.0 ( -73.30 by residue)
QMean score : 0.390
(partial model without unconserved sides chains):
PDB file :
Tito_1ZC3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZC3-query.scw
PDB file :
Tito_Scwrl_1ZC3.pdb
: