Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQLLKIFVPVIVVALLMMLLATTMNRSEGYAGSNTLTIYNWGDYIDPSLITKFEKETGIKVIYQTFDSNEAMMTKIEQGGTTFDIAVPSDYAISKMKEENLLIPLDHSKLPNEKYLDPRFMDL--SFDDDNKYSMPYFWGTLGIIYNKE-----MFPDKNFDTWNALFDPE----LKNQ-ILLIDGAREVMGLGLNSLGYSLNDTNK-AHLQAARDKLETMTPNVKAIVGDEIKLLMADNEAGVAVTFSGEA------AEMLSENEDLEYVIPKDGSNLWFDNMVIPKTAKNVDGAHKFINFMLKPENAAINAEYVGYATPNAKAVELLPKEISSDERFYPDMD---ELNNLEVYDNLGKRMLSYYNELFLEFKMYRK |
| 1A99 Chain:B ((3-326)) | ---------------------------------QKTLHIYNWSDYIAPDTVANFEKETGIKVVYDVFDSNEVLEGKLMAGSTGFDLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKDEAYQFLNYLLRPDVVAHISDHVFYANANKAATPLVSAEVRENPGIYPPADVRAKLFTLKVQD---------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1A99.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -100361 for 2447 contacts (-41.0/contact) +
2D Compatibility (PS) -32827 + (NN) -16750 + (LL) 5584
1D Compatibility (HY) -19600 + (ID) 5700
Total energy: -169654.0 ( -69.33 by residue)
QMean score : 0.477
|
|
|