Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNQVAPFYADHVGSILRTKGIKDAREKFQSGEITALELRKIENTEIKYIVEKQKEVGLKSITDGEFRRAWWHFDFLENLDGVEGYDAAGGIQFSKVQTKSHSVKITGPIDFTTHPFIEDFIFLKEAVGDNHVAKQTIPSPAMLHYRGDIEYQPYLDDAEKFANDLATAYQKAIQAFYDAGCRYLQLDDTSWSYLCSDEQREVVRQRGFDPETLQETYKNLINEAIKHKPADMVITMHICRGNFRSTWIAEGGYGPVAETLFGKLNIDGFFLEYDNERSGDFAPLKYVT----RPDLKIVLGLITSKTGELEDEAAIKARIEEASEIVPLSQLRLSPQCGFASTEEGNILTEEEQWDKLRYVVRLANDIWGE |
| 1U1J Chain:A ((429-760)) | ---LPILPTTTIGSFPQTVELR-------------EDYVKAIKEEIKKVVDLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRC-V-KPPVIYGDVSRPKAMTVFWSAMAQSMTS--RPMKGMLTGPVTILNWSFV---RNDQPRHETCYQIALAIKDEVEDLEKGGIGVIQIDEAALREGLPLR--------KSEHAFYLDWAVHSFRITNCGVQDSTQIHTHMCYSHFN----------DIIHSI-IDMDADVITIENSRS---DEKLLSVFREGVKYG-AGIGPGVYDIHSPRIPSSEEIADRVNKMLAVLEQNILWVNPDCGLKTRK------YTEVKPALKNMVDAAKLIRSQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U1J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -135703 for 2649 contacts (-51.2/contact) +
2D Compatibility (PS) -33684 + (NN) -14647 + (LL) 2800
1D Compatibility (HY) -6800 + (ID) 2350
Total energy: -190384.0 ( -71.87 by residue)
QMean score : 0.439
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