Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LDNNQKDLNQVIRQLKEKGIVVEKTKSRKDIWKSVSSKAMPNMTLRLQ
3DHU Chain:A ((82-100))
----LADFKALTDRAHELGMKVM-------------------------
General information:
TITO was launched using:
RESULT:
Template:
3DHU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2824 for 74 contacts (-38.2/contact) +
2D Compatibility (PS) -2015 + (NN) -483 + (LL) 1740
1D Compatibility (HY) -400 + (ID) 200
Total energy: -4182.0 ( -56.51 by residue)
QMean score : 0.992
(partial model without unconserved sides chains):
PDB file :
Tito_3DHU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DHU-query.scw
PDB file :
Tito_Scwrl_3DHU.pdb
: