Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNQAIDAILGHYSVRKFEDKDLTEEALTLLIKSAQAASTSSFVQAYSIIGITDKDIREQISAIAGNQPYTVQTGQLFIFVADLARHHAILEEHQVDTAALETSEKWLVSVIDAALAAQNMAIAAESLGLGICFIGGIRNDVEQIAEILDLPPYTMPLFGLTIGHPVANKEKAKPRLPQDLVYHENSYKKMNPETLAEYDKQIKTYYNERTAGKRVEGWSEQIARGLGRPSRLDLKAFLEKQHLNQK
1F5V Chain:A ((1-240))
MTPTIELICGHRSIRHFTDEPISEAQREAIINSARATSSSSFLQCSSIIRITDKALREELVTLTGGQKHVAQAAEFWVFCADFNRHLQICPDAQ-----LGLAEQLLLGVVDTAMMAQNALIAAESLGLGGVYIGGLRNNIEAVTKLLKLPQHVLPLFGLCLGWPADN-PDLKPRLPASILVHENSYQPLDKGALAQYDEQLAEYYLTRGSNNRRDTWSDHIRRTIIKESRPFILDYLHKQGWATR
General information:
TITO was launched using:
RESULT:
Template:
1F5V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -115542 for 1741 contacts (-66.4/contact) +
2D Compatibility (PS) -26490 + (NN) -16056 + (LL) 520
1D Compatibility (HY) -22000 + (ID) 5050
Total energy: -184618.0 ( -106.04 by residue)
QMean score : 0.524
(partial model without unconserved sides chains):
PDB file :
Tito_1F5V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1F5V-query.scw
PDB file :
Tito_Scwrl_1F5V.pdb
: