Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MAFRENVLEILEEITETDEVVQNTNIKLFDEGLLDSMATVQLLIEIEEKLDITVPVSEFDRDEWATPEMIITQLEALK
1HQB Chain:A ((2-81))
ADEAIKNGVLDILADLTGSDDVKKNLDLNLFETGLLDSMGTVQLLLELQSQFGVDAPVSEFDRKEWDTPNKIIAKVEQAQ
General information:
TITO was launched using:
RESULT:
Template:
1HQB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47527 for 541 contacts (-87.9/contact) +
2D Compatibility (PS) -8270 + (NN) -3684 + (LL) 0
1D Compatibility (HY) -8400 + (ID) 1850
Total energy: -69731.0 ( -128.89 by residue)
QMean score : 0.615
(partial model without unconserved sides chains):
PDB file :
Tito_1HQB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HQB-query.scw
PDB file :
Tito_Scwrl_1HQB.pdb
: