Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMINQKKIAGEKACEWIKDGMVVGLGTGSTVYYTIEKLGEMVNNGLHITG-VATSEETNKQAQNLGIPLKSLNDVTEIDITIDGADEIDTDFQGIKGGGGALLREKMVASASLKNIWVVSEEKLVRNLGKFPLPLEVIPFGWKQVERKLEKEHIQTNLRKQSSGEVYVTNNGNYILDIVNQTFTDAEMWQEKLAQIPGIVEHGLFLHY-VDIIICAKANGEIELIKK
3ENV Chain:B ((24-230))----KKAAGWAALKYVEKGSIVGVGTGSTVNHFIDALGTMSE---EIKGAVSSSVASTEKLEALGIKIFDCNEVASLDIYVDGADEINADREMIKGGGAALTREKIVAAIADKFICIVDGTKAVDVLGTFPLPVEVIPMARSYVARQLVKLGGDPCYR-----EGVITDNGNVILDVYGMKITNPKQLEDQINAIPGVVTVGLFAHRGADVVITGTPEG-------


General information:
TITO was launched using:
RESULT:

Template: 3ENV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92493 for 1744 contacts (-53.0/contact) +
2D Compatibility (PS) -22314 + (NN) -5743 + (LL) 1252
1D Compatibility (HY) -16400 + (ID) 4400
Total energy: -140098.0 ( -80.33 by residue)
QMean score : 0.455

(partial model without unconserved sides chains):
PDB file : Tito_3ENV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ENV-query.scw
PDB file : Tito_Scwrl_3ENV.pdb: