Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTMDDIVREGHPALREVATEVTFPLSDEEKKLGRDMLEFLINSQDEDLAEKYGLRGGVGIAAPQLAVTKRFLAIHVHDE-KDRLYSYVLYNPKIRSHSVQQACLSGGEGCLSVDREVPGYVVRSERVTIDAFDENGTPLKLRFKGYPAIVIQHEIDHLNGIMFYDHINKENPSYLPPDVDVFG
2AI9 Chain:B ((1-179))
MLTMKDIIRDGHPTLRQKAAELELPLTKEEKETLIAMREFLVNSQDEEIAKRYGLRSGVGLAAPQINISKRMIAVLIPDDGSGKSYDYMLVNPKIVSHSVQEAYLPTGEGCLSVDDNVAGLVHRHNRITIKAKDIEGNDIQLRLKGYPAIVFQHEIDHLNGVMFYDHIDKNHP--LQPHTD---
General information:
TITO was launched using:
RESULT:
Template:
2AI9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92105 for 1365 contacts (-67.5/contact) +
2D Compatibility (PS) -18993 + (NN) -8352 + (LL) 216
1D Compatibility (HY) -19600 + (ID) 5250
Total energy: -144084.0 ( -105.56 by residue)
QMean score : 0.613
(partial model without unconserved sides chains):
PDB file :
Tito_2AI9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AI9-query.scw
PDB file :
Tito_Scwrl_2AI9.pdb
: