Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAENTKNENITNILTQKLIDTRTVLIYGEINQELAEDVSKQLLLLESISNDPITIFINSQGGHVEAGDTIHDMIKFIKPTVKVVGTGWVASAGITIYLAAEKENRFSLPNTRYMIHQPAGGVQGQSTEIEIEAKEIIRMRERINRLIAEATGQSYEQISKDTDRNFWLSVNEAKDYGIVNEIIENRDGLK
4RYF Chain:D ((10-188))
---------ITNILTQKLIDTRTVLIYGEINQELAEDVSKQLLLLESISNDPITIFINSQGGHVEAGDTIHDMIKFIKPTVKVVGTGWVASAGITIYLAAEKENRFSLPNTRYMIHQPAGGVQGQSTEIEIEAKEIIRMRERINRLIAEATGQSYEQISKDTDRNFWLSVNEAKDYGIVNEIIENRDG--
General information:
TITO was launched using:
RESULT:
Template:
4RYF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103737 for 1339 contacts (-77.5/contact) +
2D Compatibility (PS) -19704 + (NN) -5088 + (LL) 676
1D Compatibility (HY) -24400 + (ID) 8950
Total energy: -161203.0 ( -120.39 by residue)
QMean score : 0.620
(partial model without unconserved sides chains):
PDB file :
Tito_4RYF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RYF-query.scw
PDB file :
Tito_Scwrl_4RYF.pdb
: