Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VEREELKAIIKQIVADKLSGAETEIPIGVSNRHIHLTETDYNQLFPNEPIQVKKWLKQPGEFAAEQTLTVVSEKGELHRVRILGPLRKFSQVELSKTDARMLGMKIPIRVSGDIEGTPGIKLVSKHSEICLPKGAIVAKRHIHLPESVANEFGVKQGDEVSVLVGSEMRSLVLNHCTIRVNNQFIPEMHIDTDEANAADIAGTNFAKIIKS |
| 1YFB Chain:A ((9-41)) | -----------------------------------------------------------------------------------------------------------------------VRKVDELGRVVIP-------------IELRRTLGIAEKDALEIYVD---------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YFB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3378 for 115 contacts (-29.4/contact) +
2D Compatibility (PS) -3526 + (NN) -1050 + (LL) 12964
1D Compatibility (HY) -4400 + (ID) 250
Total energy: 360.0 ( 3.13 by residue)
QMean score : 0.323
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