Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQIGKVTGSLWATRKDEKLNGLKLLLVEICTDETEDVRHSIVAADNAGAGNGDLVLVTTGSAARASTGDNTIPVDACIVGIIDSVERYG
4JW0 Chain:C ((1-85))
MQIGRVRGTVVSSQKEPSMVGVKFLLLQLIDEAGQPLPQYEVAADGVGAGLDEWVLFSRGSAARQVAGSEKRPVDAVVIGIIDTV----
General information:
TITO was launched using:
RESULT:
Template:
4JW0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49432 for 562 contacts (-88.0/contact) +
2D Compatibility (PS) -9076 + (NN) -4161 + (LL) 124
1D Compatibility (HY) -9600 + (ID) 1750
Total energy: -73895.0 ( -131.49 by residue)
QMean score : 0.673
(partial model without unconserved sides chains):
PDB file :
Tito_4JW0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4JW0-query.scw
PDB file :
Tito_Scwrl_4JW0.pdb
: