Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIYTKTGDKGMTRIIGGSKVSKDNIRIDAYGTLDELNSLIGYTITTL--GAEPEIQAELEQIQQQLFDAGGDLATEEGKRAYKLTSEPVAWLEDRIDIYADEPPEIEKFILPGGTQAASLLHMARTVTRRAEREIVGMLKIASSNEEVLKYVNRLSDYFFAVARVVNYRAGETDIFYKNSELVFRNKKK
3KE4 Chain:B ((31-198))
----------GTTSVIGG-RVDKDDIRVEAYGTIDEANSHIGYAMTKLQGGAFIDIYNELENIQHELFDCGGDLAIVEQKIPYKVTIVMVESLERKIDLYIEEAPPLERFILPGGSEAAATIHIARTVVRRAERSIVSLQKEVKINEVVLKYVNRLSDYLFAIARVINARLQVKDVEYN-----------
General information:
TITO was launched using:
RESULT:
Template:
3KE4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65822 for 1325 contacts (-49.7/contact) +
2D Compatibility (PS) -17755 + (NN) -7549 + (LL) 1268
1D Compatibility (HY) -15200 + (ID) 4800
Total energy: -109858.0 ( -82.91 by residue)
QMean score : 0.465
(partial model without unconserved sides chains):
PDB file :
Tito_3KE4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KE4-query.scw
PDB file :
Tito_Scwrl_3KE4.pdb
: