Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQNPTKEEIQHILKKAKVIAVVGLSDKPDRTSYRVSQIMQQA-GYKIIPVNPNADEILGEKTVKHLTDIEEHVDIVNVFRRSEFLPEIAEAFDQIDADVFWAQLGI----------ANQEAFDFLTEKGYPTVMDYCIKVAYQEMD
2CSU Chain:A ((2-154))
--------LDY-FFNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQGVKAYKSVKDIPDEIDLAIIVVPKRFVKDTLIQCGEKGVKGVVIITAGFGETGEEGKREEKELVEIAHKYGMRIIGPNCVGIMNTH--
General information:
TITO was launched using:
RESULT:
Template:
2CSU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87188 for 972 contacts (-89.7/contact) +
2D Compatibility (PS) -12896 + (NN) -745 + (LL) 768
1D Compatibility (HY) -4000 + (ID) 1150
Total energy: -105211.0 ( -108.24 by residue)
QMean score : 0.602
(partial model without unconserved sides chains):
PDB file :
Tito_2CSU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CSU-query.scw
PDB file :
Tito_Scwrl_2CSU.pdb
: