Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKQGGQGLQDYYLNQLRKEKILATVFLTNGFQLRGRVVSFDNFTVLLDVEGKQQLVFKHAISTFSPQKNVALNPDAE
4NL3 Chain:I ((1-74))
MKQGGQGLQDYYLNQLRKEKILATVFLTNGFQLRGRVVSFDNFTVLLDVEGKQQLVFKHAISTFSPQKNVALNP---
General information:
TITO was launched using:
RESULT:
Template:
4NL3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43956 for 454 contacts (-96.8/contact) +
2D Compatibility (PS) -8179 + (NN) -1861 + (LL) 172
1D Compatibility (HY) -11200 + (ID) 3700
Total energy: -68724.0 ( -151.37 by residue)
QMean score : 0.668
(partial model without unconserved sides chains):
PDB file :
Tito_4NL3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4NL3-query.scw
PDB file :
Tito_Scwrl_4NL3.pdb
: