Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKEVLSKSKEKMEKAEQALTRQLGTIRAGRANASLLDRLSVDYYGAATPVNQMASISVPEARMLLITPYDKTILGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKEAEEAKVAVRNIRREANEELKKLEKNGDITEDDLRSYGEDVQKLTDESIKNIDSITKDKEAEILEV
1ISE Chain:A ((2-185))
-ISDIRKDAEVRMDKCVEAFKTQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFDRSMSPAVEKAIMASDLGLNPNSAGSDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVGRDANDKVKALLKDKEISEDDDRRSQDDVQKLTDAAIKKIEAALADKEAELMQF
General information:
TITO was launched using:
RESULT:
Template:
1ISE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33956 for 1304 contacts (-26.0/contact) +
2D Compatibility (PS) -20532 + (NN) -12919 + (LL) 208
1D Compatibility (HY) -13600 + (ID) 4350
Total energy: -85149.0 ( -65.30 by residue)
QMean score : 0.550
(partial model without unconserved sides chains):
PDB file :
Tito_1ISE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ISE-query.scw
PDB file :
Tito_Scwrl_1ISE.pdb
: