Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKVLEQVEAIVAPITDELQLELVDIAFEKEGPNWFLRIFIDKDGGVDIDECAAVSEKVSEKMDENDPITQNYFLEVSSPGAERPLKKEQDFENAVSKYVHVTSYEPIDGRKMWEGTLVSYDGTTLVITITDKT-----RKITCEIPKDKVAKARLAIQF
3FB9 Chain:A ((16-84))
-----------------------------------------------------------------------------------------EEIKAHEGQVVEMTLENGRKRQKNRLGKLIEVYPSLFIVEFGDVEGDKQVNVYVESFTYSDILTEKNLI--
General information:
TITO was launched using:
RESULT:
Template:
3FB9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33179 for 371 contacts (-89.4/contact) +
2D Compatibility (PS) -7061 + (NN) -2342 + (LL) 6648
1D Compatibility (HY) -3200 + (ID) 350
Total energy: -39484.0 ( -106.43 by residue)
QMean score : 0.663
(partial model without unconserved sides chains):
PDB file :
Tito_3FB9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FB9-query.scw
PDB file :
Tito_Scwrl_3FB9.pdb
: