Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKLTKIQETLGKEKIEAVLV-----TSEFNRRYVSGFTGTSGVALILPEKAYFVTDFRYTEQAAKQAEGYEIVQHTGPIF-----DTVEDLLIKNDTKTLHFEADYVTVSEFKQMERVF-NRQLIPLTGFFEEMRKVKTASELKAIRTACDIADAAFAHIIQFIKPGMAEIEVSNELEFFMRRAGATSSSFDTIVASGIRSALPHGVASDKKIEVGDFVTMDYGCYYDGYCSDMTRTIAVGEPAEKLKEIYQITLDAQLKVIDSLKPGMTGIEADAIARDYISSFGYGDAFGHSLGHGIGLEIHEGPNLSFKSPQKLEVGHVVTDEPGIYLPGIGGVRIEDDLLITETGNEILIHSPKELIIL |
2ZSG Chain:B ((2-359)) | -DRSERLI------GIDAFLIMNIENSARASSVYFSGFTGSFSIILISENTRLLITDSRYTVQA-KQETDFEVREVKGGDFIDVLKKTVNDLKIK----TIALEEERVSLSLFRRISSAFGDRKFIGIDDEVKQMRMVKDEGEIEKIKQAIEISERAFLETVQQIRAGMTEKEIAALLEYTMRKEGAEGVAFDTIVASGCRSALPHGKASDKVVERGDVIVIDFGATYENYCADITRVVSIGEPSDEVKEVHSIVLEAQERALKIAKAGVTGKLLDSVAREFIREKGYGEFFGHSLGHGIGLEVHEGPAISFRNDSPLPENVVFTVEPGIYLEGKFGIRIEEDVVLKEQGCEILTTLPRSIFVV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZSG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -169421 for 2881 contacts (-58.8/contact) +
2D Compatibility (PS) -36822 + (NN) -16076 + (LL) 640
1D Compatibility (HY) -27600 + (ID) 7400
Total energy: -256679.0 ( -89.09 by residue)
QMean score : 0.544
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