Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VAKFTYDVVIIGSGASGTTVAFEAQAAGLKVAIVEER-NWGGTCVLRGCDPKKVLIGAREARNLST-RLRGKGIKQ--AATISWTDLMAFKETFVENVPESRLASFQEAGIETFFGAASFQDSHSLQVG-----DDLIYAEKIVIATGATPSTLKVEGKE--YIQTSDDFLSLEKLPDSVVFIGGGYISFEFASIALAAGRDVHIIHHNSEPLKKFDPDFVAALVANIKD-EGIHFHFDTDITKIENDGGKLH--IKGKDS-FSLQTDLIIGATGRMPNIAHLSLENASIDYTKKG-IVVNEKLQTPNNPHIYACGDVAATK-GAPLTPVVSLEAALVAKNVIGVNEKITYPAIPSVVFTSPKLASIGISTEEAKANPEKYQIKNHDTTSWYTYKRTNEQIALAKIIEDRESGQIKGAHFLSEEADYMINYIAILMKANLTLADLQSVIFAYPSPASDLTALN |
| 2QAE Chain:A ((1-457)) | ---NPYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTMDSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSFETAHSIRVNGLDGKQEMLETKKTIIATGSEPTELPFLPFDEKVVLSSTGALALPRVPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPTLDEDVTNALVGALAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGK--RETVTCEALLVSVGRRPFTGGLGLDKINVAKNERGFVKIGDHFE-TSIPDVYAIGDVV--DKGPMLAHKAEDEGVACAEILAGKPGHVNYGVIPAVIYTMPEVASVGKSEDELKKEGVAYKVGKFPFNANSRAKAVSTEDGFVKVLVDKATDRILGVHIVCTTAGELIGEACLAMEYGASSEDVGRTCHAHPTMSEALKEA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QAE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -253093 for 3817 contacts (-66.3/contact) +
2D Compatibility (PS) -47115 + (NN) -8981 + (LL) 464
1D Compatibility (HY) -20800 + (ID) 5650
Total energy: -335175.0 ( -87.81 by residue)
QMean score : 0.440
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