Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LEKYVVIGNPIRHSLSPAMQNRIFQELGMNAEYNSVLIEEDAFETEIKKLMDSGVRGFNITTPFKERILPFLDELDNLAAASGAVNTVLKKEDKWYGFNTDGKGYLEGLEEIRSITEDDSILITGAGGASKAIYLALSTHTDAKITVANRTTEKAIEMTKDNNNHHAITLEEAEKQLADFTIIIQTTSIGLEASKNKSP--ISLANVKQGTICSDIIYNPAETAFLKEAKKNGAITQNGLPMFVNQGALAFEIWTGIKPERSLMKEAVLEQLGGN
2HK7 Chain:B ((9-268))
---YGVIGFPVKHSLSPVFQNALIRYAGLNAVYLAFEINPEELKKAFEGFKALKVKGINVTVPFKEEIIPLLDYVEDTAKEIGAVNTVKFENGKAYGYNTDWIGFLKSLKSLIPEVKEKSILVLGAGGASRAVIYAL-VKEGAKVFLWNRTKEKAIKLAQ---KFPLEVVNSPEEVIDKVQVIVNTTSVGL---KDEDPEIFNYDLIKKDHVVVDIIYK--ETKLLKKAKEKGAKLLDGLPMLLWQGIEAFKIWNGCEVPYSVAERSVRDLR---
General information:
TITO was launched using:
RESULT:
Template:
2HK7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124352 for 2209 contacts (-56.3/contact) +
2D Compatibility (PS) -28042 + (NN) -12983 + (LL) -120
1D Compatibility (HY) -22800 + (ID) 5050
Total energy: -193347.0 ( -87.53 by residue)
QMean score : 0.535
(partial model without unconserved sides chains):
PDB file :
Tito_2HK7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HK7-query.scw
PDB file :
Tito_Scwrl_2HK7.pdb
: