Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENRIYLDHAATSPIHPEVIQTMLGAITNTYGNPSSIHYAGREARKALDEARHTIAKSIHATEKEIIFTSGGTEGDNLALIGTALAHKENGTH---IITSQIEHHAVLKTCEYL-ETQGFEVTYLPVDEHGIVSVESVQAALRP--ETILVSIMYGNNEIGSIQPIAEIGALLRDQQAIFHTDAVQAYGLLNINVMELGVDLLTTSSHKINGPRGVGFLYVKNGTRLAYQMHGGEQERKRRAGTENLAGICGFSAASSIMTNERELKNEEYISFKKRMAEIWRSAELDFEVNGLEADT-LPHVFSVRFPGVSIEQLLMNLDMEGIAVSSGSACTAGTVDPSHVLVALFGENHPAIQETVRISFGLGNHLEEVEMAATKISEVVTRLMKI |
| 4ISY Chain:D ((14-370)) | -----YLDHAATTPMHPAAIEAM-AAVQRTIGNASSLHTSGRSARRRIEEARELIADKLGARPSEVIFTAGGTESDNLAVKGIYWARRDAEPHRRRIVTTEVEHHAVLDSVNWLVEHEGAHVTWLPTAADGSVSATALREALQSHDDVALVSVMWANNEVGTILPIAEMSVVAMEFGVPMHSDAIQAVGQLPLDFGASGLSAMSVAGHKFGGPPGVGALLLRRDVTCVPLMHGGGQERDIRSGTPDVASAVGMATAAQIAVDGLEENSARLRLLRDRLVEGVLAEIDDVCLNGADDPMRLAGNAHFTFRGCEGDALLMLLDANGIECSTGS--------PSHVLIAM-GVDAASARGSLRLSLG------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ISY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156517 for 3027 contacts (-51.7/contact) +
2D Compatibility (PS) -37799 + (NN) -19953 + (LL) 3964
1D Compatibility (HY) -22000 + (ID) 6800
Total energy: -239105.0 ( -78.99 by residue)
QMean score : 0.507
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