Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKENKVQWQVIAGIILALIIAIFAVINVDPVEVNFLFAQAEWPLILIILGSVLCGCLIIFFLNIAKSRGMKKKVKQLTTEKAELERQLAAAKAMKTHSSKVEKRDTENAVDTTK
3NI0 Chain:A ((67-92))
-----------------------------------------------------------------------ARIKELENEVTKLNQELENLRIQKET-----------------
General information:
TITO was launched using:
RESULT:
Template:
3NI0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6271 for 95 contacts (66.0/contact) +
2D Compatibility (PS) -3172 + (NN) -3715 + (LL) 8592
1D Compatibility (HY) -1200 + (ID) 300
Total energy: 6476.0 ( 68.17 by residue)
QMean score : 0.925
(partial model without unconserved sides chains):
PDB file :
Tito_3NI0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NI0-query.scw
PDB file :
Tito_Scwrl_3NI0.pdb
: