Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKNQFDRHRRLRKTKTMRDLVRETVLHTDDLIYPIFVKDGKEPKTEVVSMPGVFQYPLHELEEEMRVVESLGIKAVILFGI-PAEKDAV-GTQAYHDHGIIQEATRLIKKSFPKILVVADTCLCEFTDHGHCGVIEN-GEILNDESLELLKQTAVSQAAAGADIIAPSNMMDGFVQVIREGLDEAGFYDIPIMSYAVKYASAFYGPFRDAAGSAPQFGDRKSYQMDPANREEALREAKSDEQEGADFLIVKPSLSYLDIMRDVKNNTNLPVVAYNVSGEYAMVKAAAQNGWIDEEKIVIEMLTSMKRAGATLIITYFAKDVSKYLNK
1W5Q Chain:B ((12-335))----YTRLRRNRRDDFSRRLVRENVLTVDDLILPVFVLDGVNQRESIPSMPGVERLSIDQLLIEAEEWVALGIPALALFPVTPVEKKSLDAAEAYNPEGIAQRATRALRERFPELGIITDVCLCEFTTHGQCGILDDDGYVLNDVSIDVLVRQALSHAEAGAQVVAPSDMMDGRIGAIREALESAGHTNVRVMAYSAKYASAYYGPFR----------NRATYQMDPANSDEALHEVAADLAEGADMVMVKPGMPYLDIVRRVKDEFRAPTFVYQVSGEYAMHMGAIQNGWL-AESVILESLTAFKRAGADGILTYFAKQAAEQLRR


General information:
TITO was launched using:
RESULT:

Template: 1W5Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -200227 for 2614 contacts (-76.6/contact) +
2D Compatibility (PS) -34551 + (NN) -19367 + (LL) 332
1D Compatibility (HY) -27200 + (ID) 7550
Total energy: -288563.0 ( -110.39 by residue)
QMean score : 0.637

(partial model without unconserved sides chains):
PDB file : Tito_1W5Q.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1W5Q-query.scw
PDB file : Tito_Scwrl_1W5Q.pdb: