Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKTIFYFSYRKTEELHAKAKELKKITTDYGYELT--------------------------------DDYQKANVIISIGGDGAFLKSVRETGFRQDCLYAGIALTEQLGQYCDFHINQLDEIIKAAIEDRWLVRRYPTIYGTVNN--TKAFYVLNEFNI-RSSIIRTLTMDLYINDSHFETFRGDGMVISTPTGSTAYNKSVNGSIVDPLLPSMQVSELASINNNKFRTLGSSFILSPKRKLRIEIASEEGNNEFPMIGMDSEA-LSIQHVHEVNLEVGDRFINIIKL--PKNSFWDKVKRNFL |
| 3PFN Chain:A ((37-359)) | SPKSVLVIKKMRDASLLQPFKELCTHLMEENMIVYVEKKVLEDPAIASDESFGAVKKKFCTFREDYDDISNQIDFIICLGGDGTLLYASSLFQG-SVPPVMAFH-LGSLGFLTPFSFENFQSQVTQVIEGNAAVVLRSRLKVRVV-KQAMQYQVLNEVVIDRGPSSYLSNVDVYLDGHLITTVQGDGVIVSTPTGSTAYAAAAGASMIHPNVPAIMITPICPHSLS-----FRPIVVPAGVELKIMLSPEARN-T-AWVSFDGRKRQEIRHGDSISITTSCYPLPSICVRDPVSDWFESLAQCL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PFN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -146157 for 2097 contacts (-69.7/contact) +
2D Compatibility (PS) -27779 + (NN) -7020 + (LL) 948
1D Compatibility (HY) -15600 + (ID) 2650
Total energy: -198258.0 ( -94.54 by residue)
QMean score : 0.447
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