Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIYFDNSATTKPNAAVLETYTKVASNYFANPSSLHRFGAKSKELLDASRKQIAAMMSALPEEIIFTSGGTEGNNLAIKGLVYSYQNRGKHIITSSIEHPSVRVVMEELEQEGFTVKYLPVDKNGVIKLEELKAALTDETILVSIMGVNNEVGSIQPLQEIGEMLSVLENTFFHVDFVQAIGKIPLTLDANSIDLLTFSGHKFHALRGTGILFKRKNVHLHPEILGGGQEMGYRSGTENLAGNVALAKALRLT-LENEPRKEALIEIRDYLLTKIAQMSDMTVHTKQSVAAPHIVCFSAKGHRGEILVHALEKEDIYISTTSACSSKQKLASSTLKAMGVTDEEATGAVRVSLSYENRLSEAKIFIQKLQEIIENLNKVVK |
4EB5 Chain:B ((2-373)) | -AYFDYTSAKPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQPVEEISEVLA--GKAALHIDATASVGQIEVDVEKIGADMLTISSNDIYGPKGVGALWIRKEAKLQPVILGGGQENGLRSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFSYIEGESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERL----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EB5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -192382 for 3328 contacts (-57.8/contact) +
2D Compatibility (PS) -41038 + (NN) -20709 + (LL) 1008
1D Compatibility (HY) -22800 + (ID) 6500
Total energy: -282421.0 ( -84.86 by residue)
QMean score : 0.513
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