Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLRGILPFAHDTLRKVVRSGDYVVDATCGNGHDTLLLAELVGINGHVLGFDIQQLAIDATNTRLENAGVSSQVELVCASHARIPEYTSKPVRAAIFNLGYLPGGDKEITTTADSTLESIGHLMELLEVGGVIILVIYHGHPAGKQEKDAVMTFCEAIPQQDFHVLSYNFINQKNDAPFVIIIEKRKPRQS
3EEY Chain:F ((3-187))
LTIKNSLGQSHDYIKMFVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKFIVQRTDFINQANCPPILVCIEK------
General information:
TITO was launched using:
RESULT:
Template:
3EEY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -173663 for 1492 contacts (-116.4/contact) +
2D Compatibility (PS) -20308 + (NN) -10294 + (LL) 216
1D Compatibility (HY) -18000 + (ID) 4050
Total energy: -226099.0 ( -151.54 by residue)
QMean score : 0.668
(partial model without unconserved sides chains):
PDB file :
Tito_3EEY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EEY-query.scw
PDB file :
Tito_Scwrl_3EEY.pdb
: