Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------MEELILSIVKPLVD-----------HPEDVVITPEETDTSLTYKLSV------SKEDMGRVIGKQGRIAKAIRTLVYAVGSKN---DKKIRLEIIE
2JOB Chain:A ((1-102))
EAYVQGWEAVAAAVASKIVGLWRNEKTELLGHECKFTVKPYLKRFQVYYKGRMWCPGWTAIRGEASTRSQSGVAGKTAKDFVRKAFQKGLISQQEANQWLSS
General information:
TITO was launched using:
RESULT:
Template:
2JOB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21248 for 480 contacts (-44.3/contact) +
2D Compatibility (PS) -7984 + (NN) 461 + (LL) 0
1D Compatibility (HY) 800 + (ID) 500
Total energy: -28471.0 ( -59.31 by residue)
QMean score : 0.371
(partial model without unconserved sides chains):
PDB file :
Tito_2JOB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JOB-query.scw
PDB file :
Tito_Scwrl_2JOB.pdb
: