Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPTPSMEDYIEKIYSLIETKGYARVSDIADELFVHPSSVTKMVQKLDKDEYLIYEKYRGLILTPKGTQMGKRLLERHALLESFLSIIGVDPSHIYHDVEGIEHHLSWNSIDRIGDVVQFFENHPDALKTLKAMETTKPETKE
2EV6 Chain:B ((4-134))
---PSMEDYIEQIYMLIEEKGYARVSDIAEALAVHPSSVTKMVQKLDKDEYLIYEKYRGLVLTSKGKKIGKRLVYRHELLEQFLRIIGVDEEKIYNDVEGIEHHLSWNSIDRIGDLVQYFEEDDARKKDLKSIQ--------
General information:
TITO was launched using:
RESULT:
Template:
2EV6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75316 for 870 contacts (-86.6/contact) +
2D Compatibility (PS) -13606 + (NN) 999 + (LL) 472
1D Compatibility (HY) -18400 + (ID) 4950
Total energy: -110801.0 ( -127.36 by residue)
QMean score : 0.555
(partial model without unconserved sides chains):
PDB file :
Tito_2EV6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EV6-query.scw
PDB file :
Tito_Scwrl_2EV6.pdb
: