Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVAVSGFKGRMGHEVVKTVLREADLELVAVLDHEPKEKNINEMVEFSSLDVPVFGNLSEMLEEIKPDCVVDFTTPKVGYSNTKTILEHGVRAVVGTTGFTPEQISELRTIAESK-KIGALIAPNFAVGAVLMMQFAQKAAKYFPNVEIIELHHDNKLDAPSGTGVKTAEMMAETREFVKQGAADEVELIEGARGAEYEGMRIHSVRLPGLVAHQEVIFGAEGQGLTIRHDSYDRISFMSGVALSVRKTKELETLIYGLENILD
1YL7 Chain:H ((2-243))
-RVGVLGAKGKVGATMVRAVAAADDLTLSAELDA---------------------GDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFFDSAEVIELHHPHKADAPSGTAARTAKLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQEVLFGTEGETLTIRHDSLDRTSFVPGVLLAVRRIAERPGLTVGLEPLLD
General information:
TITO was launched using:
RESULT:
Template:
1YL7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114092 for 1891 contacts (-60.3/contact) +
2D Compatibility (PS) -24989 + (NN) -2013 + (LL) 1608
1D Compatibility (HY) -19600 + (ID) 5800
Total energy: -164886.0 ( -87.20 by residue)
QMean score : 0.525
(partial model without unconserved sides chains):
PDB file :
Tito_1YL7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1YL7-query.scw
PDB file :
Tito_Scwrl_1YL7.pdb
: