Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LFELVNSYIDSLALFLAILFIQGMSFRKIRQYRPNWFQNGSRRLFLSILLGVYYGLAGIYFIYEGAYENNPVIYTNMRILILMVTSVFGGRIPLIFAYLVMLFGRISFDIASPTTSRYVILMTLIFAACLLVTFWKKQRFSRFVALIILNFPAILYYFVNNFDEGRILRGFEIIEYFLLFFVTALLVFYACNYIDKSNLVIQNLTETAMTDSLTNLPNMRFFTQQFGWIFTKSQKRKKSLSLFIIDIDHFKEINDFHGHQAGNTVLAQFSSILKN--RTFPPRTMFARIGGEEFAVLLQNVGTEQAALIADFFREEVERAKFPYNPASGK----VTVSIGVASASSNFSTTESLFEAADQALYQAKQNGRNQIAVHQGELE |
2V0N Chain:B ((286-448)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ELAVTDQLTGLHNRRYMTGQLDSLVKRATLGGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNVRAI---DLPCRYGGEEFVVIMPDTALADALRIAERIRMHV--SGSPFTVAHGREMLNVTISIGVSATAGEGDTPEALLKRADEGVYQAKASGRNAV-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V0N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91232 for 1153 contacts (-79.1/contact) +
2D Compatibility (PS) -17182 + (NN) -7358 + (LL) 20048
1D Compatibility (HY) -11200 + (ID) 3100
Total energy: -110024.0 ( -95.42 by residue)
QMean score : 0.521
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