Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKGTIVIVGLGLIGGSIALAIKAKHPEAHIIGIDVSYHSLEVGKSLGVIDEIGESIL-IDGPKADLLIFCCPVKETEQLLMRLPGLRLKENVIVTDTGSTKGTIMEASTALRESGITFIGGHPMAGSHKSGVRAAKELLFENAYYLLTPTKDVTEDNVTDLKTWLSGTNAKFLVLSPNEHDEITGMLSHLPHIVAAALVNQTQSFTEEHPAAFRLAAGGFRDITRVASSDPRMWTDISISNKKTLTKQLTIWRDSMNQALEMLESEDATSIYAFFDGAKEFRDSLPVHQGGAIPSFYDLFVDVPDYPGVISEVTRYLGEEEISLTNIKILETREDIFGVLQITFQSDEDRDRAKRCIETRSNYTCHYE |
| 3GGO Chain:D ((35-307)) | ---NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVRTFREIAKKLSYI-LSEDATVTDQGSVKGKLVYDLENIL--GKRFVGGHPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTDKKRLKLVKRVWEDVGGVVEYMSPELHDYVFGVVSHLPHAVAFALVDTLIHMSTPEVDLFKYPGGGFKDFTRIAKSDPIMWRDIFLENKENVMKAIEGFEKSLNHLKELIVREAEEELVEYLKEVK----------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GGO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -153925 for 2115 contacts (-72.8/contact) +
2D Compatibility (PS) -28620 + (NN) -6366 + (LL) 5908
1D Compatibility (HY) -22400 + (ID) 4500
Total energy: -209903.0 ( -99.24 by residue)
QMean score : 0.350
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