Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPEITVRAKSKTYPVYINEFALE--DIREKWTKSLAKFSHVFVLTDGHVAELHKAKL-DAVLADLPVVTY--YVAPNGEEAKTFRVYEDVMTKMIETGLDRKAVLIAFGGGVIGDLGGFVAATYMRGIPFYQVPTTVLAH-DSAVGGKVAINHPLGKNMIGNFYQPEAVIYDTQFFATLPERELRSGFAEMIKHALISDLTLLRALMDTFTEPKDFYTKDLTPFLQRGIEIKANIVAQDETEQGVRAYLNFGHTFGHALEAYGNFGKWLHGEAITYGMIYALTMSETIYGLDFDLA-EFKTWLEQLGYDTTFDASVPFSKILENMRHDKKTTFNEISMVLLEEIGKPVIFKADDDLIFETYKRVMRKGGNVI |
3ZOK Chain:C ((17-364)) | ---VDVDLGDRSYPIYIGSGLLDQPDLLQRHVHG----KRVLVVTNSTVAPIYLDKVVGALTNENPNVSVESVILPDGEKYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASFLRGVNFIQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAFYQPQCVLIDTDTLNTLPDRELASGLAEVVKYGLIRDANFFEWQEKNMPALMARDPSALAYAIKRSCENKAEVVSLDEKESGLRATLNLGHTFGHAIETGFGYGQWLHGEAVAAGMVMAVDMSYRLGWIDESIVNRAHNILQQAKLPTAPPETMTVEMFKSVMAVDKKVADGLLRLILLKGPLGNCVFTGDYD----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZOK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -215848 for 3017 contacts (-71.5/contact) +
2D Compatibility (PS) -37067 + (NN) -12915 + (LL) 2148
1D Compatibility (HY) -28000 + (ID) 6500
Total energy: -298182.0 ( -98.83 by residue)
QMean score : 0.490
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