Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VTFERLGTMNVNAEGHLEIGGVDTLKLADKYGTPLYVYDVALIR---DR-ARGFKKTFEELGVKAQVAYASKAFSAVAIYQLMAEEGLSLDVVSGGELFTAIKANFPPERIHFHGNNKSAEEIHMALDYGIGCFVIDNYYEISLLEDILIERNEKASVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIKQVLHASASFDLIGLHCHIGSQIFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFGVRYTAEDEPLEPSEYVRQIMDEVRDVAESNDIDIPEIWIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYIAVDGGMSDNIRPALYDAHYDAVLAANPEKVAEETVAIAGKCCESGDMLIWDLPLPKSNAGEVLAVFCTGAYGYAMASNYNRIPRPPVVFVENGVDKLIVARETYENLVQNDLSL |
1TWI Chain:C ((11-428)) | -------------DGRFFIDGYDAIELAEKFGTPLYVMSEEQIKINYNRYIEAFKRWEEETGKEFIVAYAYKANANLAITRLLAKLGCGADVVSGGELYIAKLSNVPSKKIVFNGNCKTKEEIIMGIEANIRAFNVDSISELILINETAKELGETANVAFRINPNVNPKTHPKISTGLKKNKFGLDVESGIAMKAIKMALEME-YVNVVGVHCHIGSQLTDISPFIEETRKVMDFVVELKEE-GIEIEDVNLGGGLGIPYYKDKQIPTQKDLADAIINTM--LKYKDKVEMPNLILEPGRSLVATAGYLLGKVHHIKETP-VTKWVMIDAGMNDMMRPAMYEAYHHIINCK--VKNEKEVVSIAGGLCESSDVFGRDRELDKVEVGDVLAIFDVGAYGISMANNYNARGRPRMVLTSKKGVFLIRERETYADLIAKDI-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TWI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -270237 for 3622 contacts (-74.6/contact) +
2D Compatibility (PS) -45009 + (NN) -18415 + (LL) 1120
1D Compatibility (HY) -29600 + (ID) 8150
Total energy: -370291.0 ( -102.23 by residue)
QMean score : 0.529
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