Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTIAKMIDHTALKPDTTKEQILTLTKEAREYGFASVCVNPTWVKLSAEQLAGAESVVCTVIGFPLGANTPEVKAFEVKDAIQNGAKEVDMVINIGALKDKDDELVERDIRAVVDVAKGKALVKVIIETCLLTDEEKVRACEIAVKAGTDFVKTSTGFSTGGATAEDIALMR---KTVGPNIGVKASGGVRTKEDVEKMIEAGATRIGASAGVAIVSG--EKPAKPDNY
3OA3 Chain:B ((56-273))
VSIAQIIDHTQLSLSATGSQIDVLCAEAKEYGFATVCVRPDYVSRAVQYLQGTQVGVTCVIGFHEGTYSTDQKVSEAKRAMQNGASELDMVMNYPWLSEKRYTDVFQDIRAVRLAAK-DAILKVILETSQLTADEIIAGCVLSSLAGADYVKTSTGFNGPGASIENVSLMSAVCDSLQSETRVKASGGIRTIEDCVKMVRAGAERLGASAGVKIVNETR---------
General information:
TITO was launched using:
RESULT:
Template:
3OA3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101933 for 1805 contacts (-56.5/contact) +
2D Compatibility (PS) -23803 + (NN) -11975 + (LL) -152
1D Compatibility (HY) -15600 + (ID) 5150
Total energy: -158613.0 ( -87.87 by residue)
QMean score : 0.607
(partial model without unconserved sides chains):
PDB file :
Tito_3OA3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OA3-query.scw
PDB file :
Tito_Scwrl_3OA3.pdb
: