Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGAKKPLFEVIASEIKDSINRDEYKTGMLMPNETALQEIFSSSRTTIRRAVDLLVEEGLVVRKNGVGLYVQPKLTSQNILEMTGVMKTDTNENLKKDIKDFYIRKAGKFYAEKFGIKENELVYSIKFVQKSENGVTLDRLILPLSLYPDLQAKDFQIINIIELVNSGKYKLFELEQELQLILAGNEQIKNMHINENDPVFKLSSVFYAENEMPIAIQYHYEDAESTKYVVDFN
4H0E Chain:B ((23-87))
-----PKYAQVKEEISSWINQGKILPDQKIPTENELMQQFGVSRHTIRKAIGDLVSQGLLYSVQGGGTFV-------------------------------------------------------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4H0E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46581 for 425 contacts (-109.6/contact) +
2D Compatibility (PS) -7244 + (NN) -2404 + (LL) 12696
1D Compatibility (HY) -3600 + (ID) 1100
Total energy: -48233.0 ( -113.49 by residue)
QMean score : 0.644
(partial model without unconserved sides chains):
PDB file :
Tito_4H0E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4H0E-query.scw
PDB file :
Tito_Scwrl_4H0E.pdb
: