Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVQEYIRLRGARENNLQNISLDIPKRKITIFTGVSGSGKSSIVFETIATESQRQLNETYSAYLRNFLPKYTQPDADSIENLSTSVIIDQKRLGGNSRSTLGTITDINSILRLLFSRVGKPSIGTANLFSFNDPAGMCPDCHGVGQKVSVDLVKLL-DPNKSLKEGAILFPTFSVDSWYWNSYAYSGF-----FDVNKKIKDYTDEEYDMLLHGKDIKVFLE-----TPMGSMNATYEGLIPKFNRLYIQKEGEMSASTKKRVDKFTHIAPCTTCEGTRLSAQALSCKING------ANIADFTAMQLDELKD-----TIARIDDPIATPMVKSVTERLQHLIDIGLGYMTLDRQTASLSGGESQRVKMIRHLNSSLTDLLYIFDEPSIGLHPRDVHRLNELLVKLRDKGNTILVVEHDPDVIKIADHVVDVGPHAGKHGGEIQFVGSYTDLLKS-DTLTGQFLNRH----LPINSKPRQPKGFLTTEKSSRFNLKNIQANIPKEVLTVITGVAGSGKSTLIHSVFLK----------------------EYPDAIV-IDQSAAHANIRSNPATYTGIMDPIRKAFGKENDV-----SPSLFSYNSKGA-CENCKGLGFTTMDLAFMDSIRTPCEVCHGKRFQDSVLQYKLNGKSISDVLELTVSEALDFFTD-KKILKKIEAMEEVGIGYVTLGQALSTLSGGECQRLKLANELHKKG---SIYIMDEPTTGLHMSDIEHILTIIHTLVNKGNTVIVIEHNVDIIRNADWIIDLGPEGGSAGGQIIFEGAPLDLLENQQSLTAKYL |
| 3ZQJ Chain:E ((294-970)) | -------------------------------------------------------------------------------------------------------------------------------FSFNSPYGACPECSGLGIRKEVDPELVVPDPDRTLAQGAVA-PWSNGHTAEYFTRMMAGLGEALGFDVDTPW--LPAKARKAILEGADEQVHVRYRNRYGRTRSYYADFEGVLAFLQRKMSQTESEQ---MKERYEGFMRDVPCPVCAGTRLKPEILAVTLA-KGEHGAKSIAEVCELSIADCADFLNALTLGPREQAIAGQVLKEIRSRLGFLLDVGLEYLSLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRRLIETLTRLRDLGNTLIVVEHDEDTIEHADWIVDIGPGAGEHGGRIVHSGPYDELLRNKDSITGAYLSGRESIEIPAIRRSVDPRRQLTVVGAREHNLRGIDVSFPLGVLTSVTGVSGSGKSTLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPIGRTPRSNPATYTGVFDKIRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACTGDGTIKIEMNFLPDVYVPCEVCQGARYNRETLEVHYKGKTVSEVLDMSIEEAAEFFEPIAGVHRYLRTLVDVGLGYVRLGQPAPTLSGGEAQRVKLASELQKRSTGRTVYILDEPTTGLHFDDIRKLLNVINGLVDKGNTVIVIEHNLDVIKTSDWIIDLGPEGGAGGGTVVAQGTPEDVAAVPASYTGKFL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZQJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -216086 for 4768 contacts (-45.3/contact) +
2D Compatibility (PS) -64783 + (NN) -13171 + (LL) 7636
1D Compatibility (HY) -49600 + (ID) 13050
Total energy: -349054.0 ( -73.21 by residue)
QMean score : 0.349
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