Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRKEWKKITAIVLLIIIIAGFFIPVPYYISKPGGTEELAPLVTVDNHPNKKDGSLSLVTIAMGKANIYTYMTAKFLPYHELEKDSEIKYENESDEEYNVRQMQMMNESKNNAIQVAYKAAGQEVKVTYDGVYVLSVKDDVPAADVLHAGDLITEIDGNAFKSSQEFIDYIHSKKVGDTVKINYKHGDKNEQADIKLTAIDKKGTPGIGITLVDDEKITADPTVKIDSEKIGGPSAGLMFSLEIYSRFQKNDLTDGKKIAGTGTIDPDGTVGRIGGIDQKVVAADKSGAKIFFAPNDPITEEMKKSDPSIESNYDTAVKTAKDIDTNMKIVPVKTFQDAVDYLKKLQ |
1Z0W Chain:A ((90-187)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GVEGDSASISIATAVISAIEGIPVD--QSVAMTGSLSVKGEVLPVGGVTQKIEAAIQAGLKKVIIPKDNI---------------DDVL-LDAEHEGKIEVIPVSRINEVLEHVLE-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1Z0W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -32529 for 695 contacts (-46.8/contact) +
2D Compatibility (PS) -11198 + (NN) -10218 + (LL) 15716
1D Compatibility (HY) -7200 + (ID) 1150
Total energy: -46579.0 ( -67.02 by residue)
QMean score : 0.419
|
|
|