Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVIAGERKGHALKAVPGNNTRPTTDKVKESLFSIIGPFFDGDMVLDLFAGSGGLGIEALSRGAERAVFIDQAALAIKTIRQNLEGCHFTERAEVYRNDAERALKLLHKNEWKFDLIFLDPPYKKQQLEKLIGTLEKLELVNENGRIICEHDKEAIMPD-TIGKFEKIKSVSYGITVLSIFEFQEA
2FPO Chain:A ((15-192))
-RIIGGQWRGRKLPVPDS------TDRVRETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAG-NARVVNSNAMSFLAQK---GTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESEVENGLPTVPAN-WSLHREKVAGQVAYRLYQRE--
General information:
TITO was launched using:
RESULT:
Template:
2FPO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101938 for 1378 contacts (-74.0/contact) +
2D Compatibility (PS) -18198 + (NN) -4040 + (LL) 556
1D Compatibility (HY) -9200 + (ID) 2450
Total energy: -135270.0 ( -98.16 by residue)
QMean score : 0.560
(partial model without unconserved sides chains):
PDB file :
Tito_2FPO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FPO-query.scw
PDB file :
Tito_Scwrl_2FPO.pdb
: