Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTEKKIDFKKEEKKFYAPKRKPERIFVPEMNFLMVDGKGDPDGEEYQKAVQSLYAIAYTIKMSKMGETRLNGYADFVVPPLEGFWWSEEKFDLKDRDAWLWTSILRQPDFVTEEVLEWAKEVA--QKKKPDVDTSRVKLVRFEEGECVQMMHIGPFSEEVKTVAELHQFMETEGLHNDTGAVRKHHEIYLSDPRKADPEKMKTILRLPVS |
1JYH Chain:A ((1-155)) | -------------------MNYEIKQEEKRTVAGFHLVG-PWEQTVKKGFEQLMMWVDSKNIV-----------------------PKEWVAVYYDN----------PDETPAEKLRCDTVVTVPGYFTLPENSEGVILTEITGGQYAVAVARVVGDDFAKPWYQFFNSLLQDSAYEMLPK--PCFEVYLNNGAEDGYWDIEMYVAVQPK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JYH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 8029 for 1044 contacts (7.7/contact) +
2D Compatibility (PS) -16167 + (NN) -2707 + (LL) 4208
1D Compatibility (HY) -2800 + (ID) 900
Total energy: -10337.0 ( -9.90 by residue)
QMean score : 0.240
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