Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKIKSFLGKSLTLVVLGVFLFSGWKIGMELYENKHNQTILDDAKAVYTKDAATTNVNGEVRDELRDLQKLNKDMVGWLTIIDTEIDYPILQSKDNDYYLHHNYKNEKARAGSIFKDYRNTNEFLDKNTIIYGHNMKDGSMFADLRKYLDKDFLVAHPTFSYESGLTN-YEVEIFAVYET----TTDFYYIETEFPETTDFEDYLQKVKQQSVYTSNVKVSGKDRIITLSTC-DTEKDYEKGRMVIQGKLVTK |
| 3PSQ Chain:B ((25-205)) | --------------------------------------------------------------QFDDLLAINSDVMAWLTVKGTHIDYPIVQGENNLEYINKSVEGEYSLSGSVFLDYRNKVTFEDKYSLIYAHHMAGNVMFGELPNFRKKSFFNKHKEFSIETKTKQKLKINIFACIQTDAFDSLLFNPID----SKNEF---LNHIKQKSVQYREILTTNESRFVALSTCEDMTTD---GRIIVIGQI--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PSQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73683 for 1325 contacts (-55.6/contact) +
2D Compatibility (PS) -18160 + (NN) -4721 + (LL) 5260
1D Compatibility (HY) -16800 + (ID) 3100
Total energy: -111204.0 ( -83.93 by residue)
QMean score : 0.502
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