Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRKMAVISLVLLLFLVGCGKEEAAQKPEQKTDKEPKIVATTVAITEIMDKLDL--PLVGIPSSSKKLPKRYADVKETGSPMGPDLEIIRMLKPDMVLSTKTLE-ADLKSGFEGADLEADFLDF-TSIASMQTEIKNLGAKFDRIEEATKLNKDLTSDIDQVKSNVAKKKKPTVLILMGVPG-SYLVVTEHAYIGDLVKLAGGENVIKDQKVEYLASNTEYLQSANPDIILRAAHGMPAEVVKMFDEEFKTNDIWKHFDAVKNNRVYDLDENLFGMTASLNAPEALKEMEKMLYDN
3MD9 Chain:A ((2-254))---------------------------------AERIVTIGGDVTEIAYALGAGDEIVARDSTS-QQPQAAQKLPDVGYMRTLNAEGILAMKPTMLLVSELAQPSLVLTQIASSGVNVVTVPGQTTPESVAMKINAVATALHQTEKGQKLIEDYQQRLAAVNKTP---LPVKVLFVMSHGGLTPMAAGQNTAADAMIRAAGGSNAMQG-FSRYRPLSQEGVIASAPDLLLITTDGVKAL---GSSENIWKLPGMALTPAGKHKRLLVVDDMAL-LGFGLETPQVLAQLREKMEQM


General information:
TITO was launched using:
RESULT:

Template: 3MD9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101026 for 2133 contacts (-47.4/contact) +
2D Compatibility (PS) -26885 + (NN) -13838 + (LL) 3864
1D Compatibility (HY) -6400 + (ID) 2400
Total energy: -146685.0 ( -68.77 by residue)
QMean score : 0.479

(partial model without unconserved sides chains):
PDB file : Tito_3MD9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3MD9-query.scw
PDB file : Tito_Scwrl_3MD9.pdb: