Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEERLYELEDKVQDLELEVHDLRDRIQLLEDKPDVRSSLLGHNVWVLIPLVAIISWMVVEIFS
3V86 Chain:A ((2-27))
----VYQLKDEVGELKGEVRALKDEVKDLK---------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3V86.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1134 for 100 contacts (11.3/contact) +
2D Compatibility (PS) -2855 + (NN) -1976 + (LL) 3500
1D Compatibility (HY) -2800 + (ID) 500
Total energy: -3497.0 ( -34.97 by residue)
QMean score : 0.672
(partial model without unconserved sides chains):
PDB file :
Tito_3V86.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3V86-query.scw
PDB file :
Tito_Scwrl_3V86.pdb
: