Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNSDIIVADFWKNNEEILTDFDKDSFCESWTENEM------WSIEFKVAQTPKNA------------HCYSFLDYESSVYFR----GQEFVVKQLSHDAVGKTLSKDIR-----APHIYYTCQD---------GRQDDAITGSF---TLEQCLT---------HIFKTDN----RGFSWEIIDPSNILEKVQQENFGNNNYLTLID-------QLLDDYGVV--VIPDNRHLVFKPREIYGAKTENFIRYKYNTDEASFDIDTLSLKTKIKGYGKVDSNGNNYFSPITYTSPEVEKWGIRWQ-----EPVSDERYTVAGNMQRRLKLELQDYPATTGSVILKNDYECEKGDYVLFIYEPLGIDYDVQIVAYKKYP------FTIKAPEITLSNN----KKSIVSIMAQLAKVLKGAK- |
| 3WFS Chain:C ((23-414)) | LNFYL---SYFDDVAKVLPREHYCFIVGGWVRDRILGEPVGYNIDVDFLTTADPVELAKNFAKRIGGHFFVFEPTIASVVLHLPPYRYRFDFSPLKGKDLEKALIEDLKERDFTANAIAVNLDDVLTIVYDPTGGIKDLEQGLLRPVSIENLKRDPVRVLRGFRIAIEKNLQLTEDFYEFVKEDPRIVLKSAVERITHELFKIMKEKTAHKVIRELYEYGVLEAIIPEIGRL----REVKDPLDEHTLKTLEYLEQVIEDRAKYLSAELLENFGKKRVLGE-------FTDVELLKWGALFHDIGKPQTTFYEHDKVGAQIVREIGERLR-WGDEATEFVAKLVRHHLRPFFLREAFKKGELKRRGMANFWRECGDIAPHLFLLSIADAMASGDEEEDIKALMETIAELESFNRNEMK |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3WFS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 77982 for 1950 contacts (40.0/contact) +
2D Compatibility (PS) -29028 + (NN) 9639 + (LL) 944
1D Compatibility (HY) 9600 + (ID) 950
Total energy: 68187.0 ( 34.97 by residue)
QMean score : -0.117
|
|
|